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  5. Sro1777_g296910.1

Sro1777_g296910.1 (Contig3318.g26032)


Aliases : Contig3318.g26032

Description : Receptor subunit 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1777_g296910.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Sro1106_g241980.1 Contig673.g7893 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro468_g149250.1 Contig3973.g30519 Hypothetical protein 0.05 OrthoFinder
Sro62_g035330.1 Contig2718.g21914 Ionotropic glutamate receptor [Interproscan]. 0.04 OrthoFinder
Sro62_g035340.1 Contig2718.g21915 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 93 419
IPR001320 Iontro_rcpt 420 498
No external refs found!