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Aliases : Contig4298.g32433
Description : Ribosomal silencing factor during starvation [Interproscan].
Gene families : OG_01_0019473 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro174_g076490.1 | |
| Cluster | HCCA: Cluster_294 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| TP07G05050.1 | No alias | Ribosomal silencing factor during starvation [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Enrichment |
| CC | GO:0000814 | ESCRT II complex | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Enrichment |
| CC | GO:0005777 | peroxisome | IEP | Enrichment |
| CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0006996 | organelle organization | IEP | Enrichment |
| BP | GO:0007031 | peroxisome organization | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Enrichment |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
| MF | GO:0016853 | isomerase activity | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| CC | GO:0030880 | RNA polymerase complex | IEP | Enrichment |
| CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| CC | GO:0036452 | ESCRT complex | IEP | Enrichment |
| CC | GO:0042579 | microbody | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0046164 | alcohol catabolic process | IEP | Enrichment |
| BP | GO:0046174 | polyol catabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Enrichment |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |