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  5. Sro1730_g294110.1

Sro1730_g294110.1 (Contig2449.g20048)


Aliases : Contig2449.g20048

Description : Lipopolysaccharide-responsive and beige-like anchor protein


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1730_g294110.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
OT_04G03470.1 No alias PH-BEACH domain; Domain of unknown function DUF4704;... 0.03 OrthoFinder
OT_06G01490.1 No alias PH-BEACH domain; BEACH domain [Interproscan]. 0.03 OrthoFinder
PTI_02G06570.1 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.02 OrthoFinder
PTI_04G02200.1 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.04 OrthoFinder
PTI_11G00330.1 No alias BEACH domain; PH-BEACH domain; WD40 repeat [Interproscan]. 0.06 OrthoFinder
PTI_25G00490.1 No alias BEACH domain; Domain of unknown function DUF4704;... 0.07 OrthoFinder
Transcript_contig_55348 55348 Hypothetical protein 0.02 OrthoFinder
XM_002503222.1 MICPUN_82791, 82791 BEACH domain; WD40 repeat; PH-BEACH domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34046.1_2968 PRW34046 BEACH domain-containing lvsC isoform X1 isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 2746 2776
IPR023362 PH-BEACH_dom 2236 2314
IPR000409 BEACH_dom 2348 2630
No external refs found!