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  5. Sro172_g075960.1

Sro172_g075960.1 (Contig1453.g13305)


Aliases : Contig1453.g13305

Description : Leucine Rich Repeat


Gene families : OG_01_0000352 (OrthoFinder) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro172_g075960.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
PTI_24G00460.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro106_g053560.1 Contig1122.g10753 Receptor-like protein kinase 0.04 OrthoFinder
Sro166_g074290.1 Contig1709.g15308 Leucine Rich Repeat 0.03 OrthoFinder
Sro1772_g296700.1 Contig4653.g34637 Leucine Rich Repeat 0.04 OrthoFinder
Sro1991_g309810.1 Contig4515.g33858 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro202_g085450.1 Contig1673.g15052 Leucine Rich Repeat 0.02 OrthoFinder
Sro239_g095860.1 Contig3063.g24382 Leucine Rich Repeat 0.04 OrthoFinder
Sro308_g113540.1 Contig2352.g19324 Leucine rich repeat N-terminal domain 0.02 OrthoFinder
Sro308_g113630.1 Contig2352.g19333 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro425_g140150.1 Contig3537.g27360 Leucine Rich Repeat 0.03 OrthoFinder
Sro45_g026850.1 Contig2311.g19067 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro45_g027150.1 Contig2311.g19097 Leucine Rich Repeat 0.02 OrthoFinder
Sro471_g149610.1 Contig458.g6174 Receptor-like protein kinase 0.03 OrthoFinder
Sro5_g004180.1 Contig4001.g30733 Leucine Rich Repeat 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!