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  5. Sro1724_g293730.1

Sro1724_g293730.1 (Contig1866.g16322)


Aliases : Contig1866.g16322

Description : Gamma-aminobutyric acid (GABA) B receptor


Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1724_g293730.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Sro1055_g236080.1 Contig2523.g20596 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro1229_g254440.1 Contig3654.g28208 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro1521_g279510.1 Contig1605.g14555 Acid type B receptor subunit 1 0.04 OrthoFinder
Sro302_g112160.2 No alias Receptor, ligand binding region; GPCR family 3,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017978 GPCR_3_C 542 808
IPR001828 ANF_lig-bd_rcpt 169 452
No external refs found!