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  5. Sro164_g073700.1

Sro164_g073700.1 (Contig4339.g32744)


Aliases : Contig4339.g32744

Description : Peroxide stress-activated histidine kinase mak2


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro164_g073700.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Cpa|evm.model.tig00000190.17 tig00000190_g13838.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00001224.9 tig00001224_g7632.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021682.12 tig00021682_g23102.t1 No description available 0.02 OrthoFinder
Dusal.0121s00015.1 33195087 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.01 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.01 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.01 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.02 OrthoFinder
Sro1435_g272380.1 Contig4058.g31114 Hybrid signal transduction histidine kinase J 0.03 OrthoFinder
Sro14_g010640.1 Contig1128.g10813 Respiration control sensor protein ArcB 0.04 OrthoFinder
Sro156_g070980.1 Contig473.g6436 Sensor protein kinase WalK (Fragment) 0.06 OrthoFinder
Sro1908_g304730.1 Contig1938.g16673 Peroxide stress-activated histidine kinase mak2 0.02 OrthoFinder
Sro20_g014160.1 Contig2954.g23446 Peroxide stress-activated histidine kinase mak2 0.05 OrthoFinder
Sro28_g018500.1 Contig404.g5459 Sensor protein kinase WalK (Fragment) 0.04 OrthoFinder
Sro351_g124000.1 Contig4381.g32954 Respiration control sensor protein ArcB 0.03 OrthoFinder
Sro431_g141430.1 Contig2042.g17546 Histidine kinase 0.02 OrthoFinder
Sro508_g156640.1 Contig2824.g22619 Hybrid signal transduction histidine kinase K 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 663 725
IPR001789 Sig_transdc_resp-reg_receiver 1074 1186
IPR003594 HATPase_C 772 909
No external refs found!