Aliases : Contig3529.g27273
Description : Prolycopene isomerase, chloroplastic
Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro1649_g288630.1 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001095.9 | tig00001095_g7025.t1 | Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00001258.10 | tig00001258_g7832.t1 | No description available | 0.09 | OrthoFinder | |
Cpa|evm.model.tig00020723.8 | tig00020723_g13427.t1 | No description available | 0.08 | OrthoFinder | |
Cre09.g407200 | 30780595 | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.03 | OrthoFinder | |
Cz14g22040.t1 | No alias | Amine oxidase [Interproscan]. | 0.06 | OrthoFinder | |
Dusal.0111s00019.1 | 33199801 | Amine oxidase [Interproscan]. | 0.03 | OrthoFinder | |
Dusal.0195s00005.1 | 33196565 | Amine oxidase [Interproscan]. | 0.03 | OrthoFinder | |
EOD31741 | No alias | Phytoene desaturase [Ensembl]. | 0.02 | OrthoFinder | |
EOD40572 | No alias | Amine oxidase [Interproscan]. | 0.04 | OrthoFinder | |
PTI_06G02910.1 | No alias | Amine oxidase [Interproscan]. | 0.01 | OrthoFinder | |
TP05G02600.1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
TP07G04730.1 | No alias | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.03 | OrthoFinder | |
Transcript_contig_61270 | 61270 | Hypothetical protein | 0.02 | OrthoFinder | |
Transcript_contig_78738 | 78738 | Hypothetical protein | 0.06 | OrthoFinder | |
Vocar.0018s0001.1 | 32898723 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
Vocar.0032s0058.1 | 32893700 | Amine oxidase [Interproscan]. | 0.01 | OrthoFinder | |
XM_002503327.1 | MICPUN_113305, 113305 | FAD dependent oxidoreductase | 0.01 | OrthoFinder | |
XM_002505732.1 | MICPUN_96715, 96715 | Amine oxidase | 0.02 | OrthoFinder | |
XM_002506999.1 | MICPUN_92711, 92711 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
XM_003054830.1 | MicpuC2_50019, 50019 | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.01 | OrthoFinder | |
XM_003055318.1 | MicpuC2_13509, 13509 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
lcl|BLLF01000127.1_cds_GFH07954.1_2431 | HaLaN_02839, GFH07954 | Prolycopene isomerase, chloroplastic | 0.03 | OrthoFinder | |
lcl|BLLF01000280.1_cds_GFH10007.1_4484 | HaLaN_05249, GFH10007 | Prolycopene isomerase, chloroplastic | 0.02 | OrthoFinder | |
lcl|LHPG02000013.1_cds_PRW44291.1_2128 | PRW44291 | ABC transporter A family member 7-like isoform B | 0.02 | OrthoFinder | |
lcl|LHPG02000013.1_cds_PRW44628.1_2401 | PRW44628 | Carotene isomerase | 0.02 | OrthoFinder | |
lcl|LHPG02000017.1_cds_PRW33144.1_3623 | PRW33144 | Carotene isomerase | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0004518 | nuclease activity | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
CC | GO:0005886 | plasma membrane | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002937 | Amino_oxidase | 94 | 406 |
No external refs found! |