Sro1631_g287230.1 (Contig2461.g20146)

Aliases : Contig2461.g20146

Description : Leptomycin B resistance protein pmd1

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro1631_g287230.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020952.7 tig00020952_g16473.t1 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021127.70 tig00021127_g18747.t1 ABC transporter B family member 25 OS=Oryza sativa... 0.01 OrthoFinder
Cre02.g083354 30785555 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
EOD34923 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
EOD35541 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
XM_002505884.1 MICPUN_88240, 88240 ATP-binding cassette superfamily 0.05 OrthoFinder
lcl|BLLF01002502.1_cds_GFH24318.1_18795 HaLaN_22091, GFH24318 ATP-binding cassette transporter 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 746 892
IPR003439 ABC_transporter-like_ATP-bd 454 603
IPR011527 ABC1_TM_dom 1024 1321
IPR011527 ABC1_TM_dom 48 297
No external refs found!