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  5. Sro15_g011250.1

Sro15_g011250.1 (Contig791.g8851)


Aliases : Contig791.g8851

Description : Importin subunit beta-4


Gene families : OG_01_0000711 (OrthoFinder) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro15_g011250.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.33 tig00000237_g20482.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder
Cpa|evm.model.tig00001030.13 tig00001030_g6453.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder
Cpa|evm.model.tig00001030.14 tig00001030_g6453.t1 No description available 0.04 OrthoFinder
Cre12.g490850 30791907 Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder
Cre14.g633750 30776542 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Cz02g21420.t1 No alias HEAT repeats; Importin-beta, N-terminal domain [Interproscan]. 0.04 OrthoFinder
Dusal.0285s00009.1 33192896 HEAT-like repeat [Interproscan]. 0.05 OrthoFinder
EOD25312 No alias Importin-beta, N-terminal domain [Interproscan]. 0.16 OrthoFinder
EOD38465 No alias Importin-beta, N-terminal domain; Importin repeat 4;... 0.12 OrthoFinder
OT_13G02820.1 No alias HEAT-like repeat [Interproscan]. 0.06 OrthoFinder
OT_18G01010.1 No alias Importin repeat 4; HEAT repeats [Interproscan]. 0.05 OrthoFinder
PTI_25G00850.1 No alias Vacuole morphology and inheritance protein 14,... 0.15 OrthoFinder
Transcript_contig_54483 54483 Importin repeat 4; HEAT repeats [Interproscan]. 0.01 OrthoFinder
UNPLg00185.t1 No alias HEAT repeats; Importin repeat 4 [Interproscan]. 0.01 OrthoFinder
Vocar.0052s0003.1 32897677 Hypothetical protein 0.04 OrthoFinder
XM_002506661.1 MICPUN_64789, 64789 HEAT-like repeat; Importin-beta, N-terminal domain... 0.2 OrthoFinder
XM_003058424.1 MicpuC2_47297, 47297 Importin-beta, N-terminal domain; HEAT-like repeat... 0.02 OrthoFinder
lcl|BLLF01000369.1_cds_GFH11050.1_5527 HaLaN_06482, GFH11050 Importin N-terminal domain-containing protein 0.01 OrthoFinder
lcl|BLLF01003202.1_cds_GFH26678.1_21155 HaLaN_24865, GFH26678 Importin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61517.1_738 PRW61517 ARM repeat-containing isoform A 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61518.1_739 PRW61518 ARM repeat-containing isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 30 104
No external refs found!