Sro15_g010940.1 (Contig791.g8820)

Aliases : Contig791.g8820

Description : Putative E3 ubiquitin-protein ligase LIN

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro15_g010940.1
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g277300	30779740	Putative U-box domain-containing protein 55...	0.01	OrthoFinder
Sro1511_g278700.1	Contig2369.g19497	E3 ubiquitin-protein ligase	0.03	OrthoFinder
Sro2403_g326410.1	Contig1134.g10895	U-box domain-containing protein	0.04	OrthoFinder
Sro920_g220220.1	Contig2508.g20522	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder
XM_003060176.1	MicpuC2_18468, 18468	U box domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Enrichment
BP	GO:0032879	regulation of localization	IEP	Enrichment
BP	GO:0032880	regulation of protein localization	IEP	Enrichment
BP	GO:0050708	regulation of protein secretion	IEP	Enrichment
BP	GO:0051046	regulation of secretion	IEP	Enrichment
BP	GO:0051049	regulation of transport	IEP	Enrichment
BP	GO:0051223	regulation of protein transport	IEP	Enrichment
BP	GO:0070201	regulation of establishment of protein localization	IEP	Enrichment
BP	GO:1903530	regulation of secretion by cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	6	77

External Links

No external refs found!