Sro15_g010940.1 (Contig791.g8820)

Aliases : Contig791.g8820

Description : Putative E3 ubiquitin-protein ligase LIN

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro15_g010940.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cre06.g277300 30779740 Putative U-box domain-containing protein 55... 0.01 OrthoFinder
Sro1511_g278700.1 Contig2369.g19497 E3 ubiquitin-protein ligase 0.03 OrthoFinder
Sro2403_g326410.1 Contig1134.g10895 U-box domain-containing protein 0.04 OrthoFinder
Sro920_g220220.1 Contig2508.g20522 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
XM_003060176.1 MicpuC2_18468, 18468 U box domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 77
No external refs found!