1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro156_g070870.1

Sro156_g070870.1 (Contig473.g6425)


Aliases : Contig473.g6425

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro156_g070870.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Sro105_g053110.1 Contig544.g7000 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1283_g259110.1 Contig1308.g12124 Hypothetical protein 0.01 OrthoFinder
Sro12_g009300.1 Contig2293.g18950 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1380_g267740.1 Contig4344.g32783 Hypothetical protein 0.05 OrthoFinder
Sro1449_g273700.1 Contig2836.g22760 Hypothetical protein 0.04 OrthoFinder
Sro1664_g289480.1 Contig291.g3803 Hypothetical protein 0.04 OrthoFinder
Sro1842_g301060.1 Contig2247.g18621 Hypothetical protein 0.02 OrthoFinder
Sro190_g082030.1 Contig3488.g27078 Hypothetical protein 0.04 OrthoFinder
Sro205_g086350.1 Contig2217.g18448 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro2184_g318100.1 Contig1506.g13760 Hypothetical protein 0.04 OrthoFinder
Sro241_g096360.1 Contig4317.g32554 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro2868_g339040.1 Contig4519.g33863 Hypothetical protein 0.05 OrthoFinder
Sro2929_g340410.1 Contig3350.g26215 CRAL-TRIO lipid binding domain [Interproscan]. 0.06 OrthoFinder
Sro3332_g346900.1 Contig1403.g12872 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro390_g132970.1 Contig4620.g34486 Hypothetical protein 0.01 OrthoFinder
Sro534_g161811.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro685_g186950.1 Contig1991.g17050 Hypothetical protein 0.04 OrthoFinder
Sro74_g040870.1 Contig4700.g34949 Hypothetical protein 0.04 OrthoFinder
Sro76_g041770.1 Contig184.g2155 Hypothetical protein 0.01 OrthoFinder
Sro796_g203650.1 Contig2034.g17463 Hypothetical protein 0.01 OrthoFinder
Sro85_g045380.1 Contig4580.g34215 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro94_g049130.1 Contig150.g1703 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004383 guanylate cyclase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006182 cGMP biosynthetic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046068 cGMP metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 148 275
No external refs found!