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  5. Sro1542_g281050.1

Sro1542_g281050.1 (Contig3357.g26286)


Aliases : Contig3357.g26286

Description : Methionyl-tRNA formyltransferase


Gene families : OG_01_0002260 (OrthoFinder) Phylogenetic Tree(s): OG0002260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1542_g281050.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Cz10g09050.t1 No alias Formyl transferase, C-terminal; Formyl transferase,... 0.03 OrthoFinder
Dusal.0755s00001.1 33194803 Formyl transferase, C-terminal [Interproscan]. 0.02 OrthoFinder
EOD07730 No alias Formyl transferase, N-terminal; Formyl transferase,... 0.02 OrthoFinder
PTI_17G02670.1 No alias Formyl transferase, N-terminal; Formyl transferase,... 0.02 OrthoFinder
Vocar.0004s0443.1 32889550 Formyl transferase, N-terminal; Formyl transferase,... 0.02 OrthoFinder
lcl|BLLF01000077.1_cds_GFH07147.1_1624 HaLaN_01908, GFH07147 Formyl transferase, N-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002376 Formyl_transf_N 54 227
IPR005793 Formyl_trans_C 278 378
No external refs found!