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  5. Sro1517_g279160.1

Sro1517_g279160.1 (Contig3255.g25682)


Aliases : Contig3255.g25682

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1517_g279160.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Sro1113_g242600.1 Contig761.g8634 Hypothetical protein 0.07 OrthoFinder
Sro186_g080620.2 No alias Hypothetical protein 0.06 OrthoFinder
Sro2089_g313940.1 Contig3733.g28631 Leucine Rich Repeat 0.04 OrthoFinder
Sro2192_g318400.1 Contig3677.g28395 Leucine Rich Repeat 0.05 OrthoFinder
Sro425_g140170.2 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!