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  5. Sro1469_g275290.1

Sro1469_g275290.1 (Contig3798.g29130)


Aliases : Contig3798.g29130

Description : Metabotropic glutamate receptor 6


Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1469_g275290.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Sro1124_g243790.1 Contig4358.g32837 Gamma-aminobutyric acid (GABA) B receptor 0.05 OrthoFinder
Sro1229_g254440.1 Contig3654.g28208 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro141_g065900.1 Contig65.g614 Acid type B receptor subunit 2 0.05 OrthoFinder
Sro1778_g296990.1 Contig1025.g10228 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro177_g077840.2 No alias GPCR family 3, C-terminal [Interproscan]. 0.05 OrthoFinder
Sro257_g100950.1 Contig2018.g17274 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro302_g112160.2 No alias Receptor, ligand binding region; GPCR family 3,... 0.03 OrthoFinder
Sro313_g114700.1 Contig1770.g15645 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro618_g176190.1 Contig3757.g28812 Gamma-aminobutyric acid (GABA) B receptor 0.05 OrthoFinder
Sro618_g176200.1 Contig3757.g28813 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro768_g199680.1 Contig2130.g17973 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 101 443
IPR017978 GPCR_3_C 531 772
No external refs found!