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  5. Sro1468_g275160.1

Sro1468_g275160.1 (Contig3834.g29482)


Aliases : Contig3834.g29482

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1468_g275160.1
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Sro100_g051080.1 Contig63.g513 Leucine Rich Repeat 0.04 OrthoFinder
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.03 OrthoFinder
Sro1236_g255140.1 Contig1374.g12617 Leucine Rich Repeat 0.03 OrthoFinder
Sro1246_g255760.1 Contig800.g8973 Leucine Rich Repeat 0.02 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.03 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.02 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.04 OrthoFinder
Sro1543_g281120.1 Contig1530.g13908 Hypothetical protein 0.05 OrthoFinder
Sro1566_g282920.1 Contig581.g7349 LRR receptor-like serine threonine-protein kinase At4g08850 0.03 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2000_g310250.1 Contig1011.g10144 Leucine Rich Repeat 0.04 OrthoFinder
Sro2158_g316940.1 Contig3584.g27688 Leucine Rich Repeat 0.05 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.03 OrthoFinder
Sro2273_g321510.1 Contig1841.g16144 Leucine Rich Repeat 0.03 OrthoFinder
Sro283_g107690.1 Contig4255.g32200 LRR receptor-like serine threonine-protein kinase At4g08850 0.03 OrthoFinder
Sro283_g107740.1 Contig4255.g32205 Leucine Rich Repeat 0.04 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.03 OrthoFinder
Sro283_g107810.1 Contig4255.g32212 Leucine Rich Repeat 0.04 OrthoFinder
Sro322_g117050.1 Contig1229.g11543 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.05 OrthoFinder
Sro337_g120550.1 Contig2800.g22513 STYKc 0.03 OrthoFinder
Sro449_g145310.1 Contig3482.g27001 Leucine Rich Repeat 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.02 OrthoFinder
Sro469_g149380.1 Contig2361.g19388 Leucine Rich Repeat 0.02 OrthoFinder
Sro526_g160530.1 Contig842.g9298 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.05 OrthoFinder
Sro52_g031220.1 Contig3190.g25205 Leucine rich repeat 0.03 OrthoFinder
Sro548_g164490.1 Contig1714.g15329 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro558_g166320.1 Contig3624.g28030 Leucine Rich Repeat 0.04 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!