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  5. Sro1465_g274990.1

Sro1465_g274990.1 (Contig1516.g13832)


Aliases : Contig1516.g13832

Description : DDE superfamily endonuclease domain [Interproscan].


Gene families : OG_01_0004740 (OrthoFinder) Phylogenetic Tree(s): OG0004740_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1465_g274990.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Sro1005_g230200.1 Contig3320.g26058 DDE superfamily endonuclease domain [Interproscan]. 0.1 OrthoFinder
Sro10_g007980.1 Contig1.g22 Hypothetical protein 0.07 OrthoFinder
Sro1919_g305460.1 Contig1207.g11350 Hypothetical protein 0.06 OrthoFinder
Sro237_g095260.1 Contig1864.g16297 Hypothetical protein 0.06 OrthoFinder
Sro2986_g341660.1 Contig224.g2648 Hypothetical protein 0.05 OrthoFinder
Sro91_g047910.1 Contig190.g2242 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
InterPro domains Description Start Stop
IPR004875 DDE_SF_endonuclease_dom 502 596
No external refs found!