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  5. Sro1435_g272380.1

Sro1435_g272380.1 (Contig4058.g31114)


Aliases : Contig4058.g31114

Description : Hybrid signal transduction histidine kinase J


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1435_g272380.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.33 tig00000792_g4184.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cpa|evm.model.tig00000889.2 tig00000889_g5289.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001224.9 tig00001224_g7632.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020610.13 tig00020610_g11951.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020934.42 tig00020934_g16110.t1 Ethylene receptor 1 OS=Solanum lycopersicum 0.01 OrthoFinder
Cpa|evm.model.tig00021179.53 tig00021179_g19270.t1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cpa|evm.model.tig00021501.5 tig00021501_g21945.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00021682.12 tig00021682_g23102.t1 No description available 0.01 OrthoFinder
Cre07.g329900 30775034 Histidine kinase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz17g16020.t1 No alias Signal transduction response regulator, receiver domain;... 0.01 OrthoFinder
Sro1466_g275080.1 Contig2211.g18351 Peroxide stress-activated histidine kinase mak2 0.03 OrthoFinder
Sro156_g070980.1 Contig473.g6436 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
Sro164_g073700.1 Contig4339.g32744 Peroxide stress-activated histidine kinase mak2 0.03 OrthoFinder
Sro168_g074900.1 Contig1642.g14821 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro20_g014160.1 Contig2954.g23446 Peroxide stress-activated histidine kinase mak2 0.04 OrthoFinder
Sro28_g018500.1 Contig404.g5459 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
Sro325_g117780.1 Contig3568.g27567 Respiration control sensor protein ArcB 0.03 OrthoFinder
Sro419_g139190.1 Contig4415.g33180 Sensor kinase/phosphatase LuxQ 0.02 OrthoFinder
Sro419_g139200.1 Contig4415.g33181 Histidine kinase 0.02 OrthoFinder
Sro431_g141430.1 Contig2042.g17546 Histidine kinase 0.03 OrthoFinder
Sro508_g156640.1 Contig2824.g22619 Hybrid signal transduction histidine kinase K 0.03 OrthoFinder
Sro636_g179300.1 Contig84.g907 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 538 600
IPR001789 Sig_transdc_resp-reg_receiver 960 1072
IPR003594 HATPase_C 647 787
No external refs found!