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  5. Sro1401_g269410.1

Sro1401_g269410.1 (Contig1376.g12625)


Aliases : Contig1376.g12625

Description : Protein disulfide isomerase


Gene families : OG_01_0000092 (OrthoFinder) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1401_g269410.1
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001038.3 tig00001038_g6513.t1 Protein disulfide isomerase-like 2-2 OS=Oryza sativa... 0.01 OrthoFinder
Cre01.g033550 30788638, PDI2 Protein disulfide-isomerase like 2-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g692751 30777894 Protein disulfide-isomerase 5-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD30174 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Sro2542_g330690.1 Contig739.g8469 Protein disulfide isomerase 0.04 OrthoFinder
Sro545_g163770.1 Contig1180.g11220 Protein disulfide isomerase 0.04 OrthoFinder
TP14G03220.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59001 59001 Endoplasmic reticulum resident protein 29, C-terminal;... 0.01 OrthoFinder
lcl|BLLF01001888.1_cds_GFH21707.1_16184 HaLaN_19065, GFH21707 Thioredoxin domain-containing protein 0.01 OrthoFinder
lcl|BLLF01005011.1_cds_GFH30597.1_25074 HaLaN_29480, GFH30597 Protein disulfide isomerase-like 5-1 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497569.1_6522 KAA8497569 Protein disulfide-isomerase like 2-1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 45 143
No external refs found!