Sro13_g009770.1 (Contig337.g4518)

Aliases : Contig337.g4518

Description : Domain containing protein

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro13_g009770.1
Cluster	HCCA: Cluster_230

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g507200	30791912	No description available	0.01	OrthoFinder
Cre14.g612850	30776377	No description available	0.01	OrthoFinder
Dusal.0073s00017.1	33194600	WD40 repeat; U box domain [Interproscan].	0.01	OrthoFinder
Sro1039_g234350.1	Contig313.g4164	Putative E3 ubiquitin-protein ligase LIN	0.04	OrthoFinder
Sro181_g079090.1	Contig4257.g32236	Putative E3 ubiquitin-protein ligase LIN	0.02	OrthoFinder
Sro2077_g313570.1	Contig1970.g16842	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder
Sro214_g088770.1	Contig282.g3662	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder
Sro2947_g340800.1	Contig1399.g12866	Putative E3 ubiquitin-protein ligase LIN	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Enrichment
BP	GO:0019748	secondary metabolic process	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
BP	GO:0030638	polyketide metabolic process	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0032879	regulation of localization	IEP	Enrichment
BP	GO:0032880	regulation of protein localization	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
BP	GO:0050708	regulation of protein secretion	IEP	Enrichment
MF	GO:0050897	cobalt ion binding	IEP	Enrichment
BP	GO:0051046	regulation of secretion	IEP	Enrichment
BP	GO:0051049	regulation of transport	IEP	Enrichment
BP	GO:0051202	phytochromobilin metabolic process	IEP	Enrichment
BP	GO:0051223	regulation of protein transport	IEP	Enrichment
BP	GO:0070201	regulation of establishment of protein localization	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
BP	GO:1903530	regulation of secretion by cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	156	212

External Links

No external refs found!