- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig3518.g27228
Description : Probable E3 ubiquitin-protein ligase RNF217
Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1343_g264600.1 | |
| Cluster | HCCA: Cluster_205 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001128.17 | tig00001128_g7183.t1 | No description available | 0.02 | OrthoFinder | |
| Cre16.g682350 | 30777070 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder | |
| Cz06g26220.t1 | No alias | IBR domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD37526 | No alias | IBR domain [Interproscan]. | 0.03 | OrthoFinder | |
| TP05G05500.1 | No alias | IBR domain [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_54525 | 54525 | IBR domain [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006473 | protein acetylation | IEP | Enrichment |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Enrichment |
| MF | GO:0008193 | tRNA guanylyltransferase activity | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016573 | histone acetylation | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| BP | GO:0043543 | protein acylation | IEP | Enrichment |
| BP | GO:0043631 | RNA polyadenylation | IEP | Enrichment |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0070568 | guanylyltransferase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002867 | IBR_dom | 536 | 574 |
| No external refs found! |