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  5. Sro1333_g263630.1

Sro1333_g263630.1 (Contig3364.g26362)


Aliases : Contig3364.g26362

Description : Receptor subunit 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1333_g263630.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Sro1418_g271020.1 Contig4752.g35218 Receptor ionotropic, NMDA 1 0.06 OrthoFinder
Sro171_g075730.1 Contig113.g1282 Receptor subunit 1 0.02 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.03 OrthoFinder
Sro224_g091510.1 Contig758.g8605 Receptor subunit 1 0.03 OrthoFinder
Sro2372_g325250.1 Contig4676.g34743 Receptor subunit 1 0.03 OrthoFinder
Sro2372_g325260.1 Contig4676.g34744 Receptor subunit 1 0.03 OrthoFinder
Sro2900_g339760.1 Contig1521.g13881 Receptor subunit 1 0.04 OrthoFinder
Sro412_g137970.1 Contig2922.g23269 Glutamate receptor, ionotropic 0.04 OrthoFinder
Sro468_g149250.1 Contig3973.g30519 Hypothetical protein 0.03 OrthoFinder
Sro557_g166130.1 Contig1427.g13183 Receptor subunit 1 0.03 OrthoFinder
Sro62_g035330.1 Contig2718.g21914 Ionotropic glutamate receptor [Interproscan]. 0.04 OrthoFinder
Sro990_g228610.1 Contig427.g5785 Receptor ionotropic, NMDA 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 198 448
No external refs found!