Sro12_g009210.1 (Contig2293.g18941)


Aliases : Contig2293.g18941

Description : Hypothetical protein


Gene families : OG_01_0003242 (OrthoFinder) Phylogenetic Tree(s): OG0003242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro12_g009210.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Sro1315_g262050.1 Contig2837.g22769 Hypothetical protein 0.06 OrthoFinder
Sro2866_g338960.1 Contig1002.g10103 Hypothetical protein 0.04 OrthoFinder
Sro331_g119200.1 Contig3186.g25157 Hypothetical protein 0.08 OrthoFinder
Sro39_g024040.1 Contig234.g2824 Hypothetical protein 0.06 OrthoFinder
Sro401_g135280.1 Contig2817.g22586 Hypothetical protein 0.08 OrthoFinder
Sro88_g046520.1 Contig265.g3310 Hypothetical protein 0.05 OrthoFinder
Sro99_g050930.1 Contig1378.g12664 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!