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  5. Sro125_g060190.1

Sro125_g060190.1 (Contig2833.g22730)


Aliases : Contig2833.g22730

Description : Inhibited guanine nucleotide-exchange protein


Gene families : OG_01_0000548 (OrthoFinder) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro125_g060190.1
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.27 tig00000241_g20884.t1 ARF guanine-nucleotide exchange factor GNL2... 0.02 OrthoFinder
Cpa|evm.model.tig00000852.23 tig00000852_g5036.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre03.g172150 30786737 Brefeldin A-inhibited guanine nucleotide-exchange... 0.02 OrthoFinder
Cz01g11170.t1 No alias Mon2, dimerisation and cyclophilin-binding domain; Sec7,... 0.02 OrthoFinder
Cz06g02180.t1 No alias Sec7 domain; Mon2, C-terminal; Sec7, C-terminal; Mon2,... 0.02 OrthoFinder
EOD08461 No alias Sec7 domain; Rab-GTPase-TBC domain [Interproscan]. 0.03 OrthoFinder
EOD15754 No alias BIG1, ArfGEF of the BIG/SEC7 subfamily [Ensembl]. 0.03 OrthoFinder
OT_04G04310.1 No alias Mon2, C-terminal; Mon2, dimerisation and... 0.02 OrthoFinder
PTI_10G02320.1 No alias Guanine nucleotide exchange factor, N-terminal; Sec7,... 0.05 OrthoFinder
PTI_19G01620.1 No alias Guanine nucleotide exchange factor, N-terminal; Sec7,... 0.02 OrthoFinder
TP07G03810.1 No alias Sec7 domain; Sec7, C-terminal; Guanine nucleotide... 0.02 OrthoFinder
Transcript_contig_81992 81992 Mon2, dimerisation and cyclophilin-binding domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_90466 90466 Sec7, C-terminal; Sec7 domain [Interproscan]. 0.02 OrthoFinder
XM_002504764.1 MICPUN_86297, 86297 Sec7, C-terminal; Sec7 domain; Guanine nucleotide... 0.02 OrthoFinder
lcl|BLLF01000671.1_cds_GFH13963.1_8440 HaLaN_09932, GFH13963 Brefeldin a-inhibited guanine nucleotide-exchange protein 2-like 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57136.1_9055 PRW57136 Brefeldin A-inhibited guanine nucleotide-exchange 2-like 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494452.1_2982 KAA8494452 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000904 Sec7_dom 703 904
IPR032629 DCB_dom 160 333
IPR032691 Sec7_N 382 551
IPR015403 Sec7_C 1279 1362
No external refs found!