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  5. Sro1236_g255140.1

Sro1236_g255140.1 (Contig1374.g12617)


Aliases : Contig1374.g12617

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1236_g255140.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Sro100_g051080.1 Contig63.g513 Leucine Rich Repeat 0.06 OrthoFinder
Sro106_g053670.1 Contig1122.g10764 Leucine Rich Repeat 0.03 OrthoFinder
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.03 OrthoFinder
Sro1126_g244030.1 Contig1609.g14564 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.03 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.03 OrthoFinder
Sro1468_g275160.1 Contig3834.g29482 Leucine Rich Repeat 0.03 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.03 OrthoFinder
Sro1543_g281120.1 Contig1530.g13908 Hypothetical protein 0.04 OrthoFinder
Sro1566_g282920.1 Contig581.g7349 LRR receptor-like serine threonine-protein kinase At4g08850 0.05 OrthoFinder
Sro1581_g283800.1 Contig585.g7355 Leucine Rich Repeat 0.03 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.02 OrthoFinder
Sro1707_g292650.1 Contig3781.g29031 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1781_g297090.1 Contig230.g2769 Receptor-like protein kinase precursor 0.05 OrthoFinder
Sro2000_g310250.1 Contig1011.g10144 Leucine Rich Repeat 0.05 OrthoFinder
Sro2158_g316940.1 Contig3584.g27688 Leucine Rich Repeat 0.04 OrthoFinder
Sro2158_g316950.1 Contig3584.g27689 Leucine Rich Repeat 0.05 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.04 OrthoFinder
Sro242_g096620.1 Contig554.g7080 Leucine Rich Repeat 0.03 OrthoFinder
Sro273_g105050.1 Contig4205.g31986 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.04 OrthoFinder
Sro283_g107810.1 Contig4255.g32212 Leucine Rich Repeat 0.03 OrthoFinder
Sro302_g112200.1 Contig378.g5078 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro320_g116550.1 Contig3665.g28316 Leucine Rich Repeat 0.03 OrthoFinder
Sro321_g116720.1 Contig56.g428 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g020780.1 Contig3715.g28551 Leucine Rich Repeat 0.04 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.03 OrthoFinder
Sro32_g020820.1 Contig3715.g28555 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.02 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.07 OrthoFinder
Sro337_g120680.1 Contig2800.g22526 Leucine-rich repeat-containing protein 0.04 OrthoFinder
Sro4136_g353110.1 Contig3023.g24105 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro449_g145310.1 Contig3482.g27001 Leucine Rich Repeat 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.01 OrthoFinder
Sro469_g149300.1 Contig2361.g19380 STYKc 0.03 OrthoFinder
Sro526_g160530.1 Contig842.g9298 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro52_g030870.1 Contig3190.g25170 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g030880.1 Contig3190.g25171 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro52_g030930.1 Contig3190.g25176 LRR receptor-like serine threonine-protein kinase 0.02 OrthoFinder
Sro52_g030940.1 Contig3190.g25177 Leucine Rich Repeat 0.02 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031200.1 Contig3190.g25203 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro52_g031210.1 Contig3190.g25204 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g031220.1 Contig3190.g25205 Leucine rich repeat 0.05 OrthoFinder
Sro52_g031230.1 Contig3190.g25206 LRR receptor-like serine threonine-protein kinase 0.06 OrthoFinder
Sro532_g161520.1 Contig1529.g13903 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro558_g166260.1 Contig3624.g28024 Leucine Rich Repeat 0.03 OrthoFinder
Sro578_g169850.1 Contig83.g894 Leucine Rich Repeat 0.07 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.01 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.03 OrthoFinder
Sro970_g226320.1 Contig1965.g16828 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!