Sro120_g058300.1 (Contig2411.g19708)


Aliases : Contig2411.g19708

Description : H2A.z


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro120_g058300.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264750 30778682, HTA14 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g264950 30779952 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g265350 30779523 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g266700 30779158 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g268050 30779224, HTA10 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g268300 30778781, HTA9 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g271350 30779391 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g273900 30779778 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g274200 30778751 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g274800 30780111, HTA26 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g275850 30779335 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g276500 30778822, HTA23 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g276950 30778754, HTA24 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre12.g504500 30793209 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre12.g504750 30792225 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre12.g505550 30793129 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre12.g506250 30793152, HTA18 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre13.g570100 30784159, HTA2 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre17.g708550 30781878, HTA20 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g709200 30782358 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g710400 30782701, HTA19 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre17.g711700 30781638, HTA5 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g713400 30781819 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g714500 30782017, HTA1 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cz02g02050.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
Cz05g04180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Cz07g08180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz08g27130.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz18g11100.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0152s00023.1 33186201 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0165s00017.1 33193347 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Dusal.0322s00015.1 33197808 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0688s00003.1 33202688 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
Dusal.0806s00004.1 33190343 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
EOD11956 No alias Putative histone H2A [Ensembl]. 0.03 OrthoFinder
OT_08G01910.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
OT_12G00910.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
OT_16G01100.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
TP05G07700.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
TP07G03180.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.03 OrthoFinder
Vocar.0001s1633.1 32885235 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0002s0391.1 32890987 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
Vocar.0002s0609.1 32891207 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0006s0196.1 32893915 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Vocar.0016s0282.1 32897978 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0027s0138.1 32887219 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
XM_002501356.1 MICPUN_81242, 81242 Histone H2A 0.03 OrthoFinder
XM_002503584.1 MICPUN_83469, 83469 Histone H2A 0.02 OrthoFinder
XM_003054928.1 MicpuC2_12375, 12375 Histone H2A 0.02 OrthoFinder
XM_003058838.1 MicpuC2_17393, 17393 Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
XM_003063174.1 MicpuC2_11887, 11887 Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
lcl|BLLF01003345.1_cds_GFH27088.1_21565 HaLaN_25351, GFH27088 Histone H2A 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57339.1_9052 PRW57339 Histone H2A 0.01 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Enrichment
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0033176 proton-transporting V-type ATPase complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 102 134
IPR007125 Histone_H2A/H2B/H3 15 101
No external refs found!