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  5. Sro1202_g252020.1

Sro1202_g252020.1 (Contig4304.g32483)


Aliases : Contig4304.g32483

Description : (LipO)protein


Gene families : OG_01_0001739 (OrthoFinder) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1202_g252020.1
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
Sro1508_g278430.1 Contig142.g1574 (Lipo)protein 0.04 OrthoFinder
Sro234_g094410.1 Contig3223.g25488 Mycoplasma protein of unknown function, DUF285 0.02 OrthoFinder
Sro291_g109450.1 Contig4055.g31091 (Lipo)protein 0.03 OrthoFinder
Sro47_g027900.1 Contig1172.g11183 Hypothetical protein 0.05 OrthoFinder
Sro77_g041900.1 Contig338.g4585 Hypothetical protein 0.02 OrthoFinder
Sro877_g214610.1 Contig139.g1542 Inherit from NOG: embryo development ending in birth or... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005046 DUF285 280 380
IPR005046 DUF285 56 133
IPR005046 DUF285 452 551
IPR005046 DUF285 135 235
No external refs found!