1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro119_g057960.1

Sro119_g057960.1 (Contig2194.g18269)


Aliases : Contig2194.g18269

Description : Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001


Gene families : OG_01_0000269 (OrthoFinder) Phylogenetic Tree(s): OG0000269_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro119_g057960.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
PTI_13G02020.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Sro110_g054980.1 Contig1501.g13721 Protein kinase 0.03 OrthoFinder
Sro119_g057960.2 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.09 OrthoFinder
Sro119_g058100.1 Contig2194.g18283 Probable LIM domain-containing serine/threonine-protein... 0.05 OrthoFinder
Sro119_g058180.1 Contig2194.g18291 Probable LIM domain-containing serine/threonine-protein... 0.06 OrthoFinder
Sro1571_g283380.1 Contig4686.g34849 Activated protein kinase catalytic subunit alpha-1 0.03 OrthoFinder
Sro15_g010930.1 Contig791.g8819 Ephrin type-B receptor 3 (Fragment) 0.04 OrthoFinder
Sro198_g084100.1 Contig2317.g19130 Probable LIM domain-containing serine/threonine-protein... 0.04 OrthoFinder
Sro2662_g334000.1 Contig651.g7773 Activated protein kinase catalytic subunit alpha-1 0.06 OrthoFinder
Sro2811_g337610.1 Contig4012.g30871 SPS1-related proline-alanine-rich protein kinase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 78 386
No external refs found!