1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro118_g057840.1

Sro118_g057840.1 (Contig2714.g21854)


Aliases : Contig2714.g21854

Description : BTB/POZ domain [Interproscan].


Gene families : OG_01_0000120 (OrthoFinder) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro118_g057840.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Sro1161_g247820.1 Contig369.g4994 BTB/Kelch-associated [Interproscan]. 0.03 OrthoFinder
Sro1259_g256960.1 Contig1889.g16467 BACK 0.03 OrthoFinder
Sro1466_g275060.1 Contig2211.g18349 BTB/POZ domain [Interproscan]. 0.05 OrthoFinder
Sro2059_g312890.1 Contig3244.g25638 BTB/Kelch-associated [Interproscan]. 0.03 OrthoFinder
Sro2360_g324731.1 No alias BTB/POZ domain; SPRY domain [Interproscan]. 0.06 OrthoFinder
Sro285_g108130.1 Contig491.g6619 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro3378_g347421.1 No alias BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro791_g203010.1 Contig1638.g14767 BTB/POZ domain [Interproscan]. 0.07 OrthoFinder
Sro81_g043390.1 Contig1318.g12168 Kelch-like protein 2 0.03 OrthoFinder
Sro81_g043410.1 Contig1318.g12170 Kelch-like protein 3 0.06 OrthoFinder
Sro898_g217661.1 No alias Hypothetical protein 0.1 OrthoFinder
Sro900_g217860.1 Contig2813.g22564 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 16 119
No external refs found!