Sro1154_g247120.1 (Contig2345.g19268)

Aliases : Contig2345.g19268

Description : Sel1 domain protein repeat-containing protein

Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1154_g247120.1
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
Sro1438_g272650.1	Contig3435.g26744	Sel1 domain protein repeat-containing protein	0.03	OrthoFinder
Sro341_g121570.1	Contig3952.g30289	Sel1 domain protein repeat-containing protein	0.02	OrthoFinder
Sro459_g147320.1	Contig4657.g34672	U box domain [Interproscan].	0.03	OrthoFinder
Sro792_g203190.1	Contig385.g5187	Sel1 domain protein repeat-containing protein	0.03	OrthoFinder
Sro983_g227810.1	Contig79.g820	Sel1 domain protein repeat-containing protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007155	cell adhesion	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	29	78
IPR006597	Sel1-like	130	157
IPR006597	Sel1-like	173	202

External Links

No external refs found!