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  5. Sro1150_g246700.1

Sro1150_g246700.1 (Contig603.g7507)


Aliases : Contig603.g7507

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1150_g246700.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Sro1566_g282920.1 Contig581.g7349 LRR receptor-like serine threonine-protein kinase At4g08850 0.02 OrthoFinder
Sro2000_g310250.1 Contig1011.g10144 Leucine Rich Repeat 0.02 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.03 OrthoFinder
Sro337_g120680.1 Contig2800.g22526 Leucine-rich repeat-containing protein 0.02 OrthoFinder
Sro526_g160530.1 Contig842.g9298 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro52_g031200.1 Contig3190.g25203 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro52_g031210.1 Contig3190.g25204 Leucine Rich Repeat 0.02 OrthoFinder
Sro52_g031220.1 Contig3190.g25205 Leucine rich repeat 0.02 OrthoFinder
Sro573_g168940.1 Contig1565.g14208 Fibronectin leucine rich transmembrane protein 2 0.08 OrthoFinder
Sro755_g197630.1 Contig3465.g26898 Leucine Rich Repeat 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!