1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1141_g245690.1

Sro1141_g245690.1 (Contig1502.g13746)


Aliases : Contig1502.g13746

Description : Zinc metalloprotease FTSH, chloroplastic


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1141_g245690.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Dusal.0491s00006.1 33192500 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60934.1_745 PRW60934 ATP-dependent zinc metalloprotease chloroplastic isoform C 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51102.1_1065 PRW51102 ATP-dependent zinc metalloprotease FTSH chloroplastic isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008376 acetylgalactosaminyltransferase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0032580 Golgi cisterna membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 343 524
IPR041569 AAA_lid_3 547 591
No external refs found!