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  5. Sro1121_g243420.1

Sro1121_g243420.1 (Contig138.g1535)


Aliases : Contig138.g1535

Description : Large subunit methyltransferase I


Gene families : OG_01_0001960 (OrthoFinder) Phylogenetic Tree(s): OG0001960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1121_g243420.1
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
OT_18G01140.1 No alias S-adenosylmethionine-dependent methyltransferase; RlmI,... 0.02 OrthoFinder
TP09G02460.1 No alias S-adenosylmethionine-dependent methyltransferase [Interproscan]. 0.02 OrthoFinder
XM_002500666.1 MICPUN_68263, 68263 S-adenosylmethionine-dependent methyltransferase [Interproscan]. 0.01 OrthoFinder
XM_003064352.1 MicpuC2_46042, 46042 S-adenosylmethionine-dependent methyltransferase; RlmI,... 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32940.1_3703 PRW32940 Ribosomal RNA large subunit methyltransferase I 0.02 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491077.1_9834 KAA8491077 Ribosomal RNA large subunit methyltransferase I 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019614 SAM-dep_methyl-trfase 855 1030
No external refs found!