Sro110_g054750.1 (Contig1501.g13698)

Aliases : Contig1501.g13698

Description : WHIM2 domain; Linker histone H1/H5, domain H15 [Interproscan].

Gene families : OG_01_0031802 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro110_g054750.1
Cluster	HCCA: Cluster_266

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0004527	exonuclease activity	IEP	Enrichment
MF	GO:0004559	alpha-mannosidase activity	IEP	Enrichment
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005795	Golgi stack	IEP	Enrichment
BP	GO:0005996	monosaccharide metabolic process	IEP	Enrichment
BP	GO:0006013	mannose metabolic process	IEP	Enrichment
BP	GO:0006473	protein acetylation	IEP	Enrichment
BP	GO:0006474	N-terminal protein amino acid acetylation	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Enrichment
MF	GO:0008455	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0015923	mannosidase activity	IEP	Enrichment
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0017196	N-terminal peptidyl-methionine acetylation	IEP	Enrichment
BP	GO:0018206	peptidyl-methionine modification	IEP	Enrichment
BP	GO:0019318	hexose metabolic process	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
CC	GO:0031248	protein acetyltransferase complex	IEP	Enrichment
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Enrichment
CC	GO:0031414	N-terminal protein acetyltransferase complex	IEP	Enrichment
CC	GO:0031417	NatC complex	IEP	Enrichment
CC	GO:0031984	organelle subcompartment	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
BP	GO:0043543	protein acylation	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
CC	GO:0098791	Golgi apparatus subcompartment	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
CC	GO:1902493	acetyltransferase complex	IEP	Enrichment
CC	GO:1990234	transferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR028941	WHIM2_dom	663	742
IPR005818	Histone_H1/H5_H15	126	191

External Links

No external refs found!

Sro110_g054750.1 (Contig1501.g13698)

Expression Profile

Co-expression Networks

Functional Annotation