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Aliases : Contig4546.g33967
Description : Leucine Rich Repeat
Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1104_g241810.1 | |
| Cluster | HCCA: Cluster_259 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1018_g231870.1 | Contig4480.g33669 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1021_g232240.1 | Contig686.g7986 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1113_g242600.1 | Contig761.g8634 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro1113_g242630.1 | Contig761.g8637 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1308_g261400.1 | Contig2858.g22916 | Receptor-like protein | 0.03 | OrthoFinder | |
| Sro1545_g281350.1 | Contig3310.g25937 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1715_g293070.1 | Contig3682.g28417 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro1715_g293100.1 | Contig3682.g28420 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1753_g295440.1 | Contig4414.g33157 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro1817_g299560.1 | Contig1204.g11343 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro186_g080590.1 | Contig266.g3340 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro186_g080700.1 | Contig266.g3351 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1928_g306040.1 | Contig2945.g23386 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro195_g083160.1 | Contig4576.g34153 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro199_g084530.1 | Contig257.g3191 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro2120_g315390.1 | Contig3476.g26953 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro320_g116580.1 | Contig3665.g28319 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro496_g154670.1 | Contig3388.g26497 | Leucine Rich Repeat | 0.09 | OrthoFinder | |
| Sro614_g175770.1 | Contig1589.g14431 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro647_g180970.1 | Contig3562.g27513 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro820_g207300.1 | Contig34.g212 | Leucine rich repeat N-terminal domain | 0.05 | OrthoFinder | |
| Sro830_g208240.1 | Contig4325.g32639 | Leucine Rich Repeat | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015696 | ammonium transport | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
| MF | GO:0022836 | gated channel activity | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |