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  5. Sro1072_g238010.1

Sro1072_g238010.1 (Contig2124.g17931)


Aliases : Contig2124.g17931

Description : Synaptic vesicle 2-related protein


Gene families : OG_01_0000495 (OrthoFinder) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1072_g238010.1
Cluster HCCA: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold5660.5 5660.5 Major facilitator superfamily [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59360 59360 Major facilitator, sugar transporter-like [Interproscan]. 0.01 OrthoFinder
XM_002499675.1 MICPUN_79121, 79121 Major facilitator superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 106 478
No external refs found!