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  5. Sro1070_g237710.1

Sro1070_g237710.1 (Contig4107.g31344)


Aliases : Contig4107.g31344

Description : Glyceraldehyde-3-phosphate dehydrogenase (Fragment)


Gene families : OG_01_0000155 (OrthoFinder) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1070_g237710.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.36 tig00000157_g9626.t1 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.03 OrthoFinder
Cre01.g010900 30788366, GAP3 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate... 0.03 OrthoFinder
Cre07.g354200 30774610, GAP2 Enzyme classification.EC_1 oxidoreductases.EC_1.2... 0.01 OrthoFinder
Cz11g09290.t1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.02 OrthoFinder
Dusal.0090s00001.1 33189953 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.02 OrthoFinder
EOD10729 No alias Glycerinaldehyde-3-phosphate dehydrogenase,... 0.03 OrthoFinder
EOD12107 No alias Glyceraldehyde 3-phosphate dehydrogenase [Ensembl]. 0.03 OrthoFinder
EOD29981 No alias Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.04 OrthoFinder
OT_01G01540.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.03 OrthoFinder
OT_10G03410.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.03 OrthoFinder
PTI_02G03330.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.03 OrthoFinder
PTI_15G03500.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.02 OrthoFinder
PTI_16G03180.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.05 OrthoFinder
PTI_16G03270.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.05 OrthoFinder
SymbC1.scaffold2041.6 2041.6 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.01 OrthoFinder
SymbC1.scaffold726.6 726.6 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.02 OrthoFinder
TP05G01950.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.03 OrthoFinder
TP05G05020.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.05 OrthoFinder
Transcript_contig_79715 79715 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.01 OrthoFinder
Vocar.0013s0021.1 32896311 Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.04 OrthoFinder
XM_002503424.1 MICPUN_104876, 104876 Glyceraldehyde-3-phosphate dehydrogenase a chloroplast... 0.05 OrthoFinder
XM_002507057.1 MICPUN_104695, 104695 Glyceraldehyde-3-phosphate dehydrogenase B (GAPB) 0.05 OrthoFinder
XM_003055613.1 MicpuC2_49403, 49403 Hypothetical protein (GAPDH_3) 0.02 OrthoFinder
lcl|BLLF01003495.1_cds_GFH27490.1_21967 HaLaN_25818, GFH27490 Glyceraldehyde 3-phosphate dehydrogenase 0.01 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20420.1_5624 PRW20420 Glyceraldehyde-3-phosphate dehydrogenase 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498450.1_7403 KAA8498450 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020828 GlycerAld_3-P_DH_NAD(P)-bd 4 103
IPR020829 GlycerAld_3-P_DH_cat 155 314
No external refs found!