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  5. Sro1068_g237480.1

Sro1068_g237480.1 (Contig852.g9367)


Aliases : Contig852.g9367

Description : Stress transcription factor B-2b


Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1068_g237480.1
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
PTI_12G00260.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
PTI_15G02560.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
PTI_23G00270.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
PTI_23G00690.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
Sro1238_g255240.1 Contig4178.g31871 Shock factor protein 4 0.03 OrthoFinder
Sro1900_g304250.1 Contig3998.g30694 Stress transcription factor B-2b 0.05 OrthoFinder
Sro1900_g304260.1 Contig3998.g30695 Heat stress transcription factor 0.04 OrthoFinder
Sro450_g145560.1 Contig271.g3481 Heat stress transcription factor 0.04 OrthoFinder
Sro53_g031420.1 Contig1592.g14482 Shock factor protein 0.03 OrthoFinder
Sro800_g204320.1 Contig413.g5566 Heat stress transcription factor 0.08 OrthoFinder
TP01G11570.1 No alias Hypothetical protein 0.02 OrthoFinder
TP01G11580.1 No alias Hypothetical protein 0.03 OrthoFinder
TP04G06980.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
TP04G07230.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.04 OrthoFinder
TP05G08480.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
TP13G02600.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 135 228
No external refs found!