Sro1011_g230970.1 (Contig997.g10070)


Aliases : Contig997.g10070

Description : Sel1 domain protein repeat-containing protein


Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1011_g230970.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Sro1215_g253210.1 Contig2655.g21465 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro1311_g261780.1 Contig1682.g15105 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro1438_g272650.1 Contig3435.g26744 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro341_g121570.1 Contig3952.g30289 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder
Sro3_g002900.1 Contig3832.g29475 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro459_g147320.1 Contig4657.g34672 U box domain [Interproscan]. 0.03 OrthoFinder
Sro639_g179810.1 Contig197.g2302 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro65_g036930.1 Contig155.g1763 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro792_g203190.1 Contig385.g5187 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro870_g213590.1 Contig1807.g15929 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro983_g227810.1 Contig79.g820 Sel1 domain protein repeat-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
InterPro domains Description Start Stop
IPR003613 Ubox_domain 129 197
No external refs found!