- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig63.g513
Description : Leucine Rich Repeat
Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro100_g051080.1 | |
| Cluster | HCCA: Cluster_196 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro111_g055190.1 | Contig567.g7196 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro1236_g255140.1 | Contig1374.g12617 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro1246_g255760.1 | Contig800.g8973 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro1331_g263500.1 | Contig1733.g15456 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1460_g274600.1 | Contig332.g4412 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1468_g275160.1 | Contig3834.g29482 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1566_g282920.1 | Contig581.g7349 | LRR receptor-like serine threonine-protein kinase At4g08850 | 0.03 | OrthoFinder | |
| Sro181_g079000.1 | Contig4257.g32227 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro2000_g310250.1 | Contig1011.g10144 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro2158_g316930.1 | Contig3584.g27687 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro2158_g316940.1 | Contig3584.g27688 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro2223_g319710.1 | Contig2179.g18196 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro255_g100350.1 | Contig2336.g19212 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro273_g105050.1 | Contig4205.g31986 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro283_g107690.1 | Contig4255.g32200 | LRR receptor-like serine threonine-protein kinase At4g08850 | 0.06 | OrthoFinder | |
| Sro283_g107810.1 | Contig4255.g32212 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro283_g107820.1 | Contig4255.g32213 | LRR receptor-like serine threonine-protein kinase | 0.02 | OrthoFinder | |
| Sro320_g116560.1 | Contig3665.g28317 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro322_g117050.1 | Contig1229.g11543 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro32_g020790.1 | Contig3715.g28552 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.03 | OrthoFinder | |
| Sro32_g020820.1 | Contig3715.g28555 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.01 | OrthoFinder | |
| Sro449_g145300.1 | Contig3482.g27000 | STYKc | 0.05 | OrthoFinder | |
| Sro449_g145320.1 | Contig3482.g27002 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro45_g026870.1 | Contig2311.g19069 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro469_g149300.1 | Contig2361.g19380 | STYKc | 0.03 | OrthoFinder | |
| Sro469_g149380.1 | Contig2361.g19388 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro52_g030880.1 | Contig3190.g25171 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro52_g030930.1 | Contig3190.g25176 | LRR receptor-like serine threonine-protein kinase | 0.01 | OrthoFinder | |
| Sro52_g031140.1 | Contig3190.g25197 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro558_g166260.1 | Contig3624.g28024 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro558_g166310.1 | Contig3624.g28029 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro638_g179650.1 | Contig628.g7628 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro73_g040430.1 | Contig3929.g30144 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro86_g045610.1 | Contig2999.g23839 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro895_g217150.1 | Contig1937.g16657 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro970_g226320.1 | Contig1965.g16828 | Leucine Rich Repeat | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0005096 | GTPase activator activity | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
| MF | GO:0030695 | GTPase regulator activity | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |