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  5. Sro1007_g230360.1

Sro1007_g230360.1 (Contig188.g2174)


Aliases : Contig188.g2174

Description : Protein of unknown function (DUF1517)


Gene families : OG_01_0000935 (OrthoFinder) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1007_g230360.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021105.31 tig00021105_g18240.t1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre01.g004450 30789152, CPLD42 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cz01g23120.t1 No alias Protein of unknown function DUF1517 [Interproscan]. 0.01 OrthoFinder
Dusal.0413s00009.1 33191120 Protein of unknown function DUF1517 [Interproscan]. 0.01 OrthoFinder
PTI_07G03150.1 No alias Protein of unknown function DUF1517 [Interproscan]. 0.03 OrthoFinder
PTI_10G02640.1 No alias Protein of unknown function DUF1517 [Interproscan]. 0.04 OrthoFinder
Vocar.0024s0233.1 32890495 Protein of unknown function DUF1517 [Interproscan]. 0.01 OrthoFinder
XM_002505769.1 MICPUN_109398, 109398 Protein of unknown function DUF1517 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001348.1_cds_GFH18747.1_13224 HaLaN_15601, GFH18747 Protein of unknown function DUF1517 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01005378.1_cds_GFH31110.1_25587 HaLaN_30085, GFH31110 Protein of unknown function DUF1517 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR010903 DUF1517 194 386
No external refs found!