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  5. Sro1002_g229830.1

Sro1002_g229830.1 (Contig2058.g17652)


Aliases : Contig2058.g17652

Description : Affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase


Gene families : OG_01_0004324 (OrthoFinder) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1002_g229830.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Sro2483_g328940.1 Contig3811.g29194 Acid type B receptor subunit 2 0.03 OrthoFinder
Sro392_g133400.1 Contig4514.g33846 Acid type B receptor subunit 2 0.03 OrthoFinder
Sro708_g190670.1 Contig4523.g33871 Gamma-aminobutyric acid (GABA) B receptor 0.02 OrthoFinder
Sro710_g191100.1 Contig1639.g14782 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR017978 GPCR_3_C 616 865
IPR002073 PDEase_catalytic_dom 1113 1343
No external refs found!