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  5. lcl|VRMN01000007.1_cds_KAA8493436.1_9737

lcl|VRMN01000007.1_cds_KAA8493436.1_9737 (KAA8493436)


Aliases : KAA8493436

Description : Splicing factor 3A subunit 2


Gene families : OG_01_0003351 (OrthoFinder) Phylogenetic Tree(s): OG0003351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000007.1_cds_KAA8493436.1_9737
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre06.g252700 30779714, SPL2 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Dusal.0694s00005.1 33185243 Zinc-finger of C2H2 type; SF3A2 domain [Interproscan]. 0.01 OrthoFinder
TP06G02360.1 No alias SF3A2 domain; Zinc-finger of C2H2 type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR031781 SF3A2_dom 119 213
No external refs found!