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  5. lcl|VRMN01000007.1_cds_KAA8493290.1_9591

lcl|VRMN01000007.1_cds_KAA8493290.1_9591 (KAA8493290)


Aliases : KAA8493290

Description : Sodium channel protein type 11 subunit alpha


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000007.1_cds_KAA8493290.1_9591
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.67 tig00020830_g14450.t1 No description available 0.02 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.02 OrthoFinder
OT_06G02060.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
OT_18G00730.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_18G00760.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54760 54760 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002507743.1 MICPUN_84447, 84447 Voltage-gated ion channel superfamily (CAV3) 0.02 OrthoFinder
lcl|BLLF01000954.1_cds_GFH16150.1_10627 HaLaN_12519, GFH16150 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Enrichment
BP GO:0001932 regulation of protein phosphorylation IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0042325 regulation of phosphorylation IEP Enrichment
BP GO:0043549 regulation of kinase activity IEP Enrichment
BP GO:0045859 regulation of protein kinase activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051338 regulation of transferase activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR031649 GPHH_dom 1763 1814
IPR005821 Ion_trans_dom 1173 1442
IPR005821 Ion_trans_dom 1504 1747
IPR005821 Ion_trans_dom 682 924
IPR005821 Ion_trans_dom 185 466
No external refs found!