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  5. lcl|VRMN01000005.1_cds_KAA8494017.1_3881

lcl|VRMN01000005.1_cds_KAA8494017.1_3881 (KAA8494017)


Aliases : KAA8494017

Description : 60S ribosomal protein L14


Gene families : OG_01_0003162 (OrthoFinder) Phylogenetic Tree(s): OG0003162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000005.1_cds_KAA8494017.1_3881
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.50 tig00000194_g14778.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder
Cre17.g701200 30782127, RPL14 Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder
Cz03g21090.t1 No alias Ribosomal protein L14e domain [Interproscan]. 0.11 OrthoFinder
Dusal.0723s00004.1 33203597 Ribosomal protein L14e domain [Interproscan]. 0.07 OrthoFinder
EOD33918 No alias Ribosomal protein L14e domain [Interproscan]. 0.12 OrthoFinder
OT_06G03360.1 No alias Ribosomal protein L14e domain [Interproscan]. 0.07 OrthoFinder
PTI_03G00800.1 No alias Ribosomal protein L14e domain [Interproscan]. 0.16 OrthoFinder
Sro37_g023400.1 Contig1425.g13156 60S ribosomal protein L14 0.21 OrthoFinder
SymbC1.scaffold4442.3 4442.3 Ribosomal protein L14e domain [Interproscan]. 0.03 OrthoFinder
TP02G03790.1 No alias Ribosomal protein L14e domain [Interproscan]. 0.19 OrthoFinder
Vocar.0004s0210.1 32889813 Ribosomal protein L14e domain [Interproscan]. 0.14 OrthoFinder
XM_002499712.1 MICPUN_53957, 53957 Ribosomal protein L14e domain [Interproscan]. 0.12 OrthoFinder
XM_003062106.1 MicpuC2_28876, 28876 Ribosomal protein L14e domain [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01000030.1_cds_GFH06254.1_731 HaLaN_00855, GFH06254 Ribosomal_L14e domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003442.1_cds_GFH27352.1_21829 HaLaN_25658, GFH27352 Ribosomal_L14e domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60503.1_4556 PRW60503 60S ribosomal L14 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 47 119
No external refs found!