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  5. lcl|VRMN01000002.1_cds_KAA8497422.1_1151

lcl|VRMN01000002.1_cds_KAA8497422.1_1151 (KAA8497422)


Aliases : KAA8497422

Description : Thioredoxin-1


Gene families : OG_01_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497422.1_1151
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021428.2 tig00021428_g21143.t1 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder
Cre09.g391900 30780233 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder
OT_10G03350.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold351.8 351.8 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
TP03G02400.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_003055546.1 MicpuC2_50406, 50406 Thioredoxin domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000360.1_cds_GFH10937.1_5414 HaLaN_06343, GFH10937 Thioredoxin domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000620.1_cds_GFH13511.1_7988 HaLaN_09410, GFH13511 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000641.1_cds_GFH13688.1_8165 HaLaN_09622, GFH13688 Thioredoxin domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 4 103
No external refs found!