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  5. lcl|VRMN01000002.1_cds_KAA8496700.1_429

lcl|VRMN01000002.1_cds_KAA8496700.1_429 (KAA8496700)


Aliases : KAA8496700

Description : Sporulation protein RMD1


Gene families : OG_01_0000596 (OrthoFinder) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496700.1_429
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Vocar.0036s0120.1 32892159 Domain of unknown function DUF155 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58687.1_7876 PRW58687 Sporulation RMD1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003734 DUF155 150 356
No external refs found!