Aliases : KAA8496562
Description : Eukaryotic translation initiation factor 4E-1
Gene families : OG_01_0001366 (OrthoFinder) Phylogenetic Tree(s): OG0001366_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000002.1_cds_KAA8496562.1_291 | |
Cluster | HCCA: Cluster_78 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000076.152 | tig00000076_g2443.t1 | Eukaryotic translation initiation factor NCBP... | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00000241.158 | tig00000241_g21024.t1 | Eukaryotic translation initiation factor NCBP OS=Oryza... | 0.07 | OrthoFinder | |
Cre03.g199900 | 30786876, EIF4E | Eukaryotic translation initiation factor 4E-1... | 0.05 | OrthoFinder | |
Cz01g00030.t1 | No alias | Translation Initiation factor eIF- 4e [Interproscan]. | 0.03 | OrthoFinder | |
Dusal.0157s00015.1 | 33200054 | Translation Initiation factor eIF- 4e [Interproscan]. | 0.07 | OrthoFinder | |
EOD09372 | No alias | Translation Initiation factor eIF- 4e [Interproscan]. | 0.01 | OrthoFinder | |
OT_02G01990.1 | No alias | Translation Initiation factor eIF- 4e [Interproscan]. | 0.02 | OrthoFinder | |
PTI_04G02860.1 | No alias | Translation Initiation factor eIF- 4e [Interproscan]. | 0.01 | OrthoFinder | |
Sro189_g081380.1 | Contig744.g8502 | Eukaryotic translation initiation factor 4E | 0.08 | OrthoFinder | |
Transcript_contig_54900 | 54900 | Translation Initiation factor eIF- 4e [Interproscan]. | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0003743 | translation initiation factor activity | IEA | Interproscan |
BP | GO:0006413 | translational initiation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Enrichment |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Enrichment |
MF | GO:0003883 | CTP synthase activity | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
BP | GO:0006551 | leucine metabolic process | IEP | Enrichment |
BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
BP | GO:0009098 | leucine biosynthetic process | IEP | Enrichment |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
CC | GO:0019008 | molybdopterin synthase complex | IEP | Enrichment |
BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Enrichment |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0043177 | organic acid binding | IEP | Enrichment |
BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001040 | TIF_eIF_4E | 34 | 190 |
No external refs found! |