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  5. lcl|VRMN01000001.1_cds_KAA8499613.1_8566

lcl|VRMN01000001.1_cds_KAA8499613.1_8566 (KAA8499613)


Aliases : KAA8499613

Description : SART-1 family protein DOT2


Gene families : OG_01_0003307 (OrthoFinder) Phylogenetic Tree(s): OG0003307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499613.1_8566
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cre03.g156100 30786859 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Transcript_contig_54150 54150 SNU66/SART1 family [Interproscan]. 0.02 OrthoFinder
XM_002506297.1 MICPUN_104310, 104310 SNU66/SART1 family [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000334 3-hydroxyanthranilate 3,4-dioxygenase activity IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 450 494
No external refs found!