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  5. PTI_21G00330.1

PTI_21G00330.1


Description : DNA polymerase beta, thumb domain; DNA polymerase lambda, fingers domain; DNA polymerase beta, palm domain [Interproscan].


Gene families : OG_01_0002132 (OrthoFinder) Phylogenetic Tree(s): OG0002132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_21G00330.1
Cluster HCCA: Cluster_60


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0034061 DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR028207 DNA_pol_B_palm_palm 286 420
IPR029398 PolB_thumb 427 491
IPR018944 DNA_pol_lambd_fingers_domain 231 282
No external refs found!