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  5. PTI_20G02770.1

PTI_20G02770.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0003436 (OrthoFinder) Phylogenetic Tree(s): OG0003436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_20G02770.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.30 tig00020903_g15096.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.01 OrthoFinder
Cz12g27040.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Dusal.0437s00014.1 33198276 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000191.1_cds_GFH08872.1_3349 HaLaN_03911, GFH08872 T-complex 1 subunit beta 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57878.1_8658 PRW57878 T-complex 1 subunit beta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 29 518
No external refs found!